Package: dsBase
Title: DataSHIELD server site base functions
Description: DataSHIELD server site base functions.
Version: 6.2.0
Author: DataSHIELD Developers <datashield@newcastle.ac.uk>
Maintainer: DataSHIELD Developers <datashield@newcastle.ac.uk>
License: GPL-3
Depends: 
    R (>= 3.5.0)
Imports:
    RANN,
    nlme,
    stringr,
    lme4,
    dplyr,
    reshape2,
    polycor (>= 0.8),
    splines
AggregateMethods:
    asFactorDS1,
    asListDS,
    boxPlotGGDS,
    checkNegValueDS,
    classDS,
    corTestDS,
    corDS,
    covDS,
    dataFrameSubsetDS1,
    densityGridDS,
    extractQuantilesDS1,
    extractQuantilesDS2,
    dimDS,
    glmDS1,
    glmDS2,
    glmerSLMADS2,
    glmPredictDS.ag,
    glmSLMADS1,
    glmSLMADS2,
    glmSummaryDS.ag,
    heatmapPlotDS,
    hetcorDS,
    histogramDS1,
    histogramDS2,
    lsDS,
    isNaDS,
    isValidDS,
    kurtosisDS1,
    kurtosisDS2,
    lengthDS,
    levelsDS,
    lexisDS1,
    listDisclosureSettingsDS,
    lmerSLMADS2,
    matrixDetDS1,
    meanDS,
    meanSdGpDS,
    messageDS,
    metadataDS,
    minMaxRandDS,
    namesDS,
    numNaDS,
    quantileMeanDS,
    rangeDS,
    ranksSecureDS1,
    ranksSecureDS3,
    rmDS,
    scatterPlotDS,
    scoreVectDS,
    setSeedDS,
    skewnessDS1,
    skewnessDS2,
    table1DDS,
    table2DDS,
    tableDS,
    tableDS2,
    tapplyDS,
    testObjExistsDS,
    varDS,
    colnamesDS,
    exists=base::exists,
    is.character=base::is.character,
    is.factor=base::is.factor,
    is.list=base::is.list,
    is.null=base::is.null,
    is.numeric=base::is.numeric,
    NROW=base::NROW,
    t.test=stats::t.test
AssignMethods:
    absDS,
    asCharacterDS,
    asDataMatrixDS,
    asFactorDS2,
    asFactorSimpleDS,
    asIntegerDS,
    asListDS,
    asLogicalDS,
    asMatrixDS,
    asNumericDS,
    blackBoxDS,
    blackBoxRanksDS,
    BooleDS,
    boxPlotGG_data_TreatmentDS,
    boxPlotGG_data_Treatment_numericDS,
    cbindDS,
    cDS,
    changeRefGroupDS,
    completeCasesDS,
    dataFrameDS,
    dataFrameFillDS,
    dataFrameSortDS,
    dataFrameSubsetDS2,
    dmtC2SDS,
    elsplineDS,
    glmerSLMADS.assign,
    glmPredictDS.as,
    glmSLMADS.assign,
    glmSummaryDS.as,
    getWGSRDS,
    listDS,
    lexisDS2,
    lexisDS3,
    lmerSLMADS.assign,
    lsplineDS,
    matrixDetDS2,
    matrixDiagDS,
    matrixDimnamesDS,
    matrixDS,
    matrixInvertDS,
    matrixMultDS,
    matrixTransposeDS,
    mergeDS,
    nsDS,
    qlsplineDS,
    ranksSecureDS2,
    ranksSecureDS4,
    ranksSecureDS5,
    rbindDS,
    rBinomDS,
    recodeLevelsDS,
    recodeValuesDS,
    repDS,
    replaceNaDS,
    reShapeDS,
    rNormDS,
    rowColCalcDS,
    rPoisDS,
    rUnifDS,
    sampleDS,
    seedDS,
    seqDS,
    sqrtDS,
    subsetByClassDS,
    subsetDS,
    tableDS.assign,
    tapplyDS.assign,
    uniqueDS,
    unListDS,
    vectorDS,
    as.character=base::as.character,
    as.null=base::as.null,
    as.numeric=base::as.numeric,
    attach=base::attach,
    c=dsBase::vectorDS,
    complete.cases=stats::complete.cases,
    list=base::list,
    exp=base::exp,
    log=base::log,
    sqrt=base::sqrt,
    abs=base::abs,
    sin=base::sin,
    cos=base::cos,
    tan=base::tan,
    asin=base::asin,
    acos=base::acos,
    atan=base::atan,
    sum=base::sum,
    unlist=base::unlist
Options:
    datashield.privacyLevel=5,
    default.datashield.privacyControlLevel="permissive",
    default.nfilter.glm=0.33,
    default.nfilter.kNN=3,
    default.nfilter.string=80,
    default.nfilter.subset=3,
    default.nfilter.stringShort=20,
    default.nfilter.tab=3,
    default.nfilter.noise=0.25,
    default.nfilter.levels.density=0.33,
    default.nfilter.levels.max=40
RoxygenNote: 7.1.2
Encoding: UTF-8