reinitialize import propka cmd.bg_color("white") cmd.set("auto_zoom","off") results = [] python #resis = [["1DSB","*","30"],["1ERT","*","32"],["2TRX","*","32"],["2TRX","*","35"],["1EGO","*","11"],["1EGO","*","14"],["1MEK","*","36"],["1IUE","*","283"], #["1PPO","*","25"],["1MEG","*","25"],["1QLP","*","232"]] resis = [["1DSB","*","30"],["1ERT","*","32"]] for p,c,r in resis: cmd.fetch(p,async="0") cmd.refresh() pkavalues = propka.propka(molecule=p,chain=c,resi=r,logtime="",makebonds="no") results.append(pkavalues) cmd.refresh() python end python for p,c,r in resis: cmd.enable("%s"%(p)) cmd.show_as("cartoon","%s"%(p)) cmd.select("%s%s"%(p,r),"byres (%s and chain %s and resi %s and resn CYS)"%(p,c,r)) cmd.show("sticks","%s%s"%(p,r)) python end cmd.zoom("all")