com.era7.bioinfo.annotation.FixFastaHeaders
XX_sequences.fna
XX_sequences_header_fixed.fna
XX
com.era7.bioinfo.annotation.PredictGenes
XX_proteins_tBLASTn.xml
XX_sequences_header_fixed.fna
XX_PredictedGenes.xml
400
false
30
com.era7.bioinfo.annotation.RemoveDuplicatedGenes
XX_PredictedGenes.xml
XX_NoDuplicates.xml
XX_DiscardedGenes.xml
com.era7.bioinfo.annotation.SolveOverlappings
XX_NoDuplicates.xml
XX_SolvedOverlaps.xml
102
XX_RNA_blastn.xml
XX_sequences_header_fixed.fna
genetic_code.txt
com.era7.bioinfo.annotation.GenerateFastaFiles
XX_SolvedOverlaps.xml
XX_protein_nucleotide_sequences.fasta
XX_protein_aminoacid_sequences.fasta
com.era7.bioinfo.annotation.FillDataFromUniprot
XX_SolvedOverlaps.xml
XX_Annotation_Dismissed_incl.xml
com.era7.bioinfo.annotation.RemoveDismissedGenes
XX_Annotation_Dismissed_incl.xml
XX_Annotation.xml
com.era7.bioinfo.annotation.GenerateGffFile
XX_Annotation.xml
XX_Annotation_GFF.gff
com.era7.bioinfo.annotation.GenerateCSVFile
XX_Annotation.xml
XX_Annotation.txt
com.era7.bioinfo.annotation.GetIntergenicSequences
XX_Annotation.xml
XX_sequences_header_fixed.fna
XX_Intergenic.xml
XX_Intergenic.fasta
com.era7.bioinfo.annotation.gb.ExportGenBankFiles
XX_Annotation.xml
XX_GenBankGeneralInfo.xml
XX_sequences_header_fixed.fna
XX
com.era7.bioinfo.annotation.BasicQualityControl
XX_PredictedGenes.xml
XX_DiscardedGenes.xml
XX_NoDuplicates.xml
XX_BasicControlQuality.xml